The Killer in the Crosshairs - S6-E15
Continuity mistake: At the start, pay attention to the cable for Bones headphones. The position of the cable on her shoulders is constantly changing between camera angles. (00:01:30)
The Blackout in the Blizzard - S6-E16
Continuity mistake: The scene in which Wendell and Hodgins use scotch tape to take an x-ray has the number of photographic panels on which the x-ray appears switching from four (throughout most of the scene) to five (in the close up of the x-ray appearing).
The Blackout in the Blizzard - S6-E16
Continuity mistake: Toward the end in the elevator, Bones says there may be a way out by jumping on the seats to break them because of the rusted bolts between the 1st and 2nd seats, and they break. But at the end in Booth's apartment they are sitting in the seats, and they are numbered 1-4, but the seats look like they broke between seats 1 and 2. When the seats are intact there are 5 of them, so it should have been seats 2-5 that were intact at the end.
The Feet on the Beach - S6-E17
Plot hole: Dr. Filmore stated that he was reading on Thursday May 9th and his arm stopped working. May 9th hasn't been on a Thursday since 2002. Hard to believe that he would be working for almost 10 years with his arms being paralyzed.
The Truth in the Myth - S6-E18
Continuity mistake: Near the end, Booth holds up the bullet in a bag. The bullet keeps swapping places in the bag between shots. (00:38:50)
The Pinocchio in the Planter - S6-E20
Continuity mistake: When Booth and Bones are in the diner talking about the liars, Booth goes from having a fork in his hand to not having one and vice versa many times. (00:22:03)
The Hole in the Heart - S6-E22
Continuity mistake: In the diner at the start, when Bones is saying how it is personal, Booth has his hand up on his chin in the background. When the shot changes, his arm is lowered. (00:01:44)
The Hole in the Heart - S6-E22
Continuity mistake: In the port scene, just as Broadsky is getting ready to shoot Booth for the first time, Booth is constantly swapping from behind a blue container to a red container and is multiple times running to a blue container. However, there is only one blue container. (00:35:30)
The Prince in the Plastic - S7-E3
Other mistake: Brennan finds Angela assembling a child's toy. She asks "what is all this?" and Angela replies "this is a walking toy for my girl." But Angela didn't have a baby girl, she had a baby boy - Michael Staccato Vincent Hodgins. (00:15:00)
The Future in the Past - S8-E1
Visible crew/equipment: When Bones is on the platform and everyone has gone from the lab, Sweets arrives and we can see a woman walking behind him. There isn't supposed to be anyone at the Jeffersonian except them.
The Gunk in the Garage - S8-E3
Revealing mistake: Dr. Sweets gets shot by a stray bullet. However, before they fire their guns when Dr. Sweets says "they have guns" he already has the blood shot stain on his shirt. (00:39:10)
The Method in the Madness - S8-E5
Continuity mistake: At the start, Bones is putting her one glove on. Camera changes and both gloves are now on. (00:03:15)
The Method in the Madness - S8-E5
Continuity mistake: When Bones starts to explain about the Aztecs, Hodgins is holding a boot upright. Camera changes and the boot is now upside down. (00:06:40)
The Method in the Madness - S8-E5
Continuity mistake: When Sweets is staying at Booth's and Brennan's house, he comes downstairs after taking a bath and, as he turns, his shoulders are shown without the scars he has in another episode.
Continuity mistake: When Bones scans the pod you can see the skull in the pod has its jaw open. However the skull picture on the scanner has its jaw closed.
Continuity mistake: When Hodgins carries the first box of roaches to the remains, the positions of the roaches changes instantly. In one shot they are all over the side of the tank, in the next shot they are not. (00:21:30)
The Ghost in the Machine - S8-E9
Other mistake: Bones states she doesn't like to make assumptions in sex based on just the skull. However this is something she has done from the start. (00:01:10)
The Corpse on the Canopy - S8-E12
Audio problem: Early in the episode Angela is holding Michael Vincent and you can still hear him crying, but the baby isn't crying. (00:02:00)
The Twist in the Plot - S8-E13
Continuity mistake: When Bones is watching Booth make his video for Christine, in some shots she's stood up straight, in others she's leaning against the wall. (00:38:00)
Answer: Answering my own question here but, having contacted various people involved in the production of Bones including Kathy Reichs, Hart Hanson, Eric Milligan, and Deirdre Lovegood who portrayed Taffet onscreen I finally have the answer. No-one know how she did it due to her constantly working alone. And she never revealed this information before her death.
Ssiscool ★