Who Shot Mr. Burns? (2) - S7-E1
Factual error: When Chief Wiggum opens the revolver's chamber, there's 5 rounds with one open slot. In the next shot, we see the reverse end of the chamber and it's drawn in such a way to indicate those 5 rounds all have bullets in them still, meaning the empty slot is from when Maggie shot Mr. Burns. But revolvers don't eject spent shells automatically and no one handled the gun after it dropped on the floor. So the empty casing should have still been in there when Wiggum opens it up for the first time.
Who Shot Mr. Burns? (2) - S7-E1
Factual error: Chief Wiggum visually compares a bullet taken from Homer's gun to the bullet removed from Burns and concludes that they are exactly the same. Excluding the obvious forensic violation, the bullet removed from Burns is still whole and within its casing, meaning that either Maggie took the time to remove the casing and delicately shove it in Mr Burns' bullet wound (which is dumb) or the gun fired the whole casing along with the bullet (which would have blown up the gun).
Tree House of Horror VI - S7-E6
Factual error: In "Nightmare On Evergreen Terrace", Martin has a dream, in which he speaks Latin. At one point, he says a verb that doesn't exist: "morire". The words is "mori" (to die), "moritur" (noun dies) or "moreris" (you die). The "moirie" is also on the blackboard behind Martin. (00:08:20)
Tree House of Horror VI - S7-E6
Factual error: During the "Attack of the 50 ft. Eye Sores" segment, the family steps into the footprint of the giant donut guy to look at the label. The label should appear to be spelled backwards, but it was not.
Factual error: If Homer's stomach was really caught on the towel rail the way they show it to be, he wouldn't be able to see the scales at all without having to look round it.
Sideshow Bob's Last Gleaming - S7-E9
Factual error: Sideshow Bob couldn't hide out in the Duff blimp's helium pocket because there wouldn't be any oxygen.
Factual error: Bart uses Milhouse's glasses as binoculars, but as Milhouse is near-sighted this wouldn't work.
Answer: Willy referred to an encounter he believed he had with actual aliens, while Wiggum thought he was referring to the arcade game.