
Plot hole: When The Ray is injured on Earth X and has Red Tornado's cortex, he escapes by Vibe sending him into a portal to safety. However it is evident that Vibe doesn't know where he sent The Ray or where he would be going as later he's trying hard, searching the multiverse for him. Yet somehow The Ray is able to go across universes and winds up coming out right at Earth 1's Ray's feet to transfer his powers over to Ray and give him the Cortex. This makes no sense. The Ray can't control Vibe's powers or where he sends him, so he would have had no way of making himself exit the portal in Ray's back yard. And if Vibe sent him there on purpose, he wouldn't have been struggling to figure out where he went. The only way it makes sense at all is for it to be the most massive co-incidence possibly imaginable where he accidentally was sent to another universe and happen to come out right at the feet of that universe' version of himself. None of it adds up. (00:09:50 - 00:16:50)

Plot hole: Gus could not know that Superman was in Smallville in order to give him the fake Kryptonite.

Plot hole: Luka sneaks into Bayonetta's hotel room and plants a hidden microphone. While sneaking out, he is caught. That's when he is astonished to find a child with Bayonetta who calls her "mummy." He does eventually escape the room and sits in corner with his radio, surprised that they both went to bed and he receives nothing. The problem is: One must be an idiot to plant a mic in a lone woman's hotel room in the dead of the night, unless he truly enjoys listening to her snoring! Planting the mic in her apartment or office, or on her mobile phone makes a lot more sense.

Plot hole: During the final scare event, Mike gets a perfect score because Sully broke the simulator to allow the 6th scarer to get a perfect score no matter what. After the contest, the simulation resets and Mike pretends to scare the child in the simulator and it registers a perfect score on the scoreboard for the 6th scarer when it should really have registered a score for the 1st scarer, because the simulator had been reset.

Plot hole: Although this film is a virtual jigsaw puzzle of flashbacks, the dynamic between Dan, Laurie and Rorschach pretty much defines the movie's continuity in the present. However, when Rorschach is framed for murder and arrested, he goes directly to a maximum-security prison, apparently without trial, conviction or sentencing (all of which would require months of due-process, at least). Even if this lapse of time is some sort of artistic device to rapidly advance Rorschach's story, there is no corresponding lapse of months in the relationship between Dan and Laurie, which runs parallel with Rorschach's story. Either there is no due process for Rorschach in this story, or there is a glaring plot hole.

Plot hole: The famous line "There can be only one" is uttered in every Highlander film. At the end of the original, Connor obtained the prize by killing the Kurgan and being the last one. However, in this film and others, you find out that there are still others around, such as Duncan, the woman who was Duncan's girlfriend in Endgame, the other immortals following Jacob in Endgame, and the ones that showed up in The Source. So, why did Connor obtain the prize? He still wasn't the last one.

Plot hole: Kahn's death makes no sense. In the film, Rayden explains that the dragon tattoos flee one's body upon the person dying. And yet, Kahn is still alive and not even close to death when his tattoo flees. (Which is what kills him, since it rips him open when it flees.) It's like they couldn't figure out how to kill him in the script, so he's just spontaneously is killed by his tattoo, even though it violates the rules the film set up.

Plot hole: In the waning seconds of the championship game, the Huskies are down by 2 and UMass has the ball. Not only do the Huskies not intentionally foul to stop the clock, but UMass attempts to run a play and set up a basket when they simply could have dribbled out the clock and won the game. Both these strategies go against what any basketball team would do in this situation, especially in a championship game.

Plot hole: April and Kenshin switch place in time as they were - by some extraordinary coincidence - holding the scepter "at the same time" (if the concept makes any sense) in the exact same pose, with a switch that takes several second of intense lightning storms and 'tornado weather' as one of the Turtles put it. Here there is the assumption that 4 priests would be around the scepter exactly at the same time, and when the Turtles do switch with Norinaga's elite soldiers instead they certainly were in completely different poses, far away enough to ride horses, who did not get spooked one bit by the lightnings and sudden winds but rode as if nothing happened.

Plot hole: The fact that Buddy placed the knife and note in the steering wheel of Jerry's car is unrealistic. Buddy first met Jerry in the bathroom after school started and Jerry hasn't gone outside of the school building to his car until this point later in the morning... so there's no way that Buddy could have known which car was Jerry's to pull this stunt.

Plot hole: Aladdin breaks the lamp and that causes the castle to vanish in thin air. The many guards, servants and objects who were not part of the original enchantment but simply transported by the Vizier's wish are somehow also gone, and the genie still has his powers, despite saying that without it "I would be my own man" and that the power was in the lamp.

Plot hole: Selene has been kept in a cryogenic tank for 12 years. And for 12 years the scientists running experiments on her very conveniently kept her boots and skin tight suit in the lab. Not just that: they did not keep them in a locker or in a box, but scattered across different shelves of the glass cabinet where they also store test tubes and big bottles of chemicals. Directly in front of them, in fact. (00:10:00)

Plot hole: If the Medjai are supposed to be the guardians against Imhotep and sworn to make sure he never comes back to life then why weren't they in possession of the key that opened everything in the first place?
Suggested correction: Because it got lost in the centuries that passed. It's possible they don't even know every step on how the mummy can return.
Suggested correction: Rorschach was a famous and dangerous outlaw. We are talking about an alternate 80's here with Nixon as president and a nation-wide ban on masks (the Keene Act). Rorschach probably faced the death penalty for his long list of crimes, besides the murder he was finally captured for (not to mention to handful of cops he seriously injured whilst trying to evade capture). I don't think it's strange that his trial was quick or not fully by the book. They made sure he was locked away fast and quietly. The justice system probably works a lot faster in a world of masked vigilantes.
lionhead
Yes, Rorschach was a vigilante; but, before masked superheroes were outlawed, Rorschach was also responsible for sending dozens (if not scores) of far worse criminals to prison, thus benefitting society. This much is stated in the film. His contributions to justice would certainly carry weight, and testimony in his favor would have to be considered in any legal proceedings against him. Also, after his capture, authorities were still trying to assess his mental state, which implies that some sort of due-process was still in place. Rorschach should have received a months-long trial, at the very least.
Charles Austin Miller
To be fair, the original, Hugo Award-winning "Watchmen" graphic novel makes the same continuity leap when it comes to Rorschach's fate. Rorschach keeps a secret diary that dates everything, but it egregiously skips over his trial and sentencing, even though the relationship between Dan and Laurie remains consistent. So, we can say that the movie is faithful to the novel, but the novel itself is flawed with a gaping plot hole.
Charles Austin Miller
The cops of that city don't care about his past deeds, which includes dropping the body of a criminal in front of the police station with the message "Never." They don't like him. Not even his colleagues liked him. That was a long time ago too, he's been the sole masked vigilante for a long time and I bet the cops just started disliking him more and more for his antics. Thus, a quick trial.
lionhead