Intern in the Incinerator - S3-E6
Continuity mistake: Cam tells everyone to forget Gormagon and look at the evidence. When she does this, Angela has her hand in her pocket. When shot changes she has both hands out of her pocket and holding a folder. (00:15:50)
Intern in the Incinerator - S3-E6
Continuity mistake: After discovering the kill site, Angela is talking to Zack. When she does, so she has her hands lowered by her waist. When the camera changes her hand is now by her chest playing with her pen. (00:15:00)
Continuity mistake: While in the car, after speaking to the victim's groom for the first time, Bones is looking straight at Booth in one shot then down in her lap in the next. (00:14:15)
Soccer Mom in the Mini-Van - S3-E2
Continuity mistake: When Bones first opens the locket at the crime scene the way it's held changes between shots. (00:02:50)
The Santa in the Slush - S3-E9
Continuity mistake: Booth tells Sweets to take his hat off in the diner. When doing so, he is pointing a fork at Sweets. Camera cuts, and he is no longer pointing a fork at Sweets. (00:31:30)
The Santa in the Slush - S3-E9
Continuity mistake: When arguing in the truck and Bones says that Booth needs to accept he won't be having Parker for Christmas this year, Booth has a fist up to his head in one shot but not in the next. (00:15:15)
The Knight on the Grid - S3-E8
Continuity mistake: In the Judge's chambers, Bones puts her hand up to ask if she can something. When the shot changes to a different angle, her arms are crossed in front of her. (00:37:50)
Boy in the Time Capsule - S3-E7
Continuity mistake: Hodgins goes from holding the pocket watch in his right hand to holding it in his left hand instantly. (00:08:40)
Intern in the Incinerator - S3-E6
Continuity mistake: In the interrogation room Booth chucks the book on anaesthesiology down on the table and its position changes in relation to the folder it's on. (00:27:40)
Boy in the Time Capsule - S3-E7
Continuity mistake: When Hodgins says he took a sample of Roger, the way he's holding the liquid bottle changes between shots. (00:05:10)
Continuity mistake: The PI hands Angela a picture of a house and the way Angela holds the photo changes between shots. (00:22:30)
Continuity mistake: When Hodgins holds up the label from the clothes, the way he holds it changes between shots. (00:05:45)
Continuity mistake: At the start, the sweets that Hodgins has got in his hands changes from 1 red lolly to 2 gold coins. (00:04:30)
The Secret in the Soil - S3-E4
Continuity mistake: Just as the gang establish it's a pitchfork Hodgins has an open file in his hands. When the camera changes, he opens the folder. (00:32:10)
The Secret in the Soil - S3-E4
Continuity mistake: When taking her tablets near the start, she has left hand across her lap then up by her head in the next. (00:07:50)
The Secret in the Soil - S3-E4
Continuity mistake: When talking to the victims wife, the daughter givers her some tablets, and she grabs them with her left hand. The camera cuts and now they are in her right hand. (00:07:50)
Continuity mistake: When they get the body back to the lab, both Cam and Bones have their fingers near the forehead wound. When the shot changes, Bones' fingers are now down in the cheek wound. (00:02:30)
Soccer Mom in the Mini-Van - S3-E2
Continuity mistake: Hodgins walks up onto the platform holding a tray of equipment when talking about the victims lawyer. The way he holds the tray and the hand that's holding it, however changes between shots. (00:15:40)
The Widow's Son in the Windshield - S3-E1
Continuity mistake: In the interrogation room Booth shows the girl a picture of her and the victim kissing, and he then clasps his hands together. However, when we see Booth on the screen behind the glass which is a live feed of what's happening inside the room, his hands are clasped.
The Widow's Son in the Windshield - S3-E1
Continuity mistake: When Booth and Cam are talking about hiring Clark, Cam has her hands in a bowl of peanuts in one shot and holding a beer bottle in the next. (00:09:10)
Answer: Answering my own question here but, having contacted various people involved in the production of Bones including Kathy Reichs, Hart Hanson, Eric Milligan, and Deirdre Lovegood who portrayed Taffet onscreen I finally have the answer. No-one know how she did it due to her constantly working alone. And she never revealed this information before her death.
Ssiscool ★