Continuity mistake: In the Moscow car chase, when Bourne's car is hit by a FSB Mercedes which had been hit by a truck, the whole exhaust section of his vehicle is seen collapsing to the ground. In the next shot, the exhaust section is perfect. (01:27:50)

The Bourne Supremacy (2004)
Plot summary
Directed by: Paul Greengrass
Starring: Matt Damon, Brian Cox, Julia Stiles, Karl Urban, Joan Allen, Franka Potente
Jason Bourne is living in India with Marie. While in town, Jason sees a man who gives him a bad vibe and, upon seeing Jason, tries to kill him. After escaping, Jason then goes to Italy so his passport will pop up on radar, giving him a chance to learn who is after him. After escaping a Naples agent, he begins hunting down former Treadstone agents to learn who wants him dead and why.
Marie: Because sooner or later, you remember something good.
Jason Bourne: I do remember something good. All the time.
Trivia: In the scene when Bourne takes John Nevins and a security guard down after being captured in the consulate, Matt Damon accidentally knocked out Tim Griffin.
Question: In The Bourne Identity, Conklin orders his staff to activate all Treadstone operatives. The only one in Germany is Pico, who is based in Hamburg. In the Bourne Supremacy, Jason Bourne returns to Berlin and kills the "last" Treadstone field agent. This operative never makes mention of the fact that he killed Conklin. Was he supposed to be the same field agent as Pico from Hamburg in Bourne Identity? If so, it is a different actor playing the same role. That may not be so uncommon, but there is a mistake in the city where the German operative is based - Jason Bourne tells him: "You should have moved" - as if he was always based in Berlin, not Hamburg. Anyone have an explanation?
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Answer: Picot from The Bourne Identity is not in The Bourne Supremacy. The one Jason Bourne pays a visit is called Jardo (director Paul Greengrass mentions this on the commentary track) and lives in Munich (visible on screen), ie. South Germany.