Plot hole: When the DigiDestined return to the real world, Izzy states that only a few minutes have passed by despite the weeks that have elapsed in the DigiWorld. However, in an earlier episode, Tai returns to the real world for hours and upon his return to the DigiWorld, only a few weeks have passed by.
The Man Who Was Never Born - S1-E6
Plot hole: Andro has memorized "every detail" of Cabot Jr.'s life, including his mother's name, Noel. Yet when he travels to the past, meets Noel and learns her name, he still mistakes Cabot Sr. for Cabot Jr., who isn't born yet. Having memorized all those details, he would have known the moment he met her that Noel was Jr.'s mother. Andro's confusion makes no sense. (00:28:00)
Taose! Ankoku Phoenix gundan - S1-E8
Plot hole: Andromeda is wearing his full armor (he's the only one doing that) at the end of the episode. The armor includes the chain that is used three times just in this episode alone to detect the bad guys, and that does it without need for explicit orders to do so, but with no explanation he's not detecting the enemy behind the tree. (00:22:10)
The Bank Job - S3-E1
Plot hole: When Toby, McCluskey, and the others are looking at the bank's security camera footage, Toby asks to zoom in on Newman's tattoo, and then Toby asks if he can borrow someone's cell phone so he can ask Oz about the bank manager. It cuts to Oz at the hospital as his cell phone rings - when Oz picks up his cell he presses the button and promptly says, "Hey, Toby, what's up?" It's quite impossible for Oz to have known that it was Toby calling him if Toby was using someone else's cell, and he did not even have the chance to hear Toby's voice. Those telepathic abilities belong to Toby, not Oz.
Triumvirate of Terror! - S3-E8
Plot hole: After Superman thwarts Lex's plan and knocks the Kryptonite into the sewers, Lex yells in frustration, splits his power suit off and flies away on a jet pack. Superman just lets him go. Wouldn't Superman chase him and catch him, especially seeing as how weak Lex would be like that? (00:07:35)
Plot hole: When Two-Face and his men have broken into the new D.A.'s office to find dirt on Rupert Thorne, one of his men finds a file detailing Thorne's record of Swiss bank accounts, money laundering, blackmail and payoffs that Two-Face tried for years to subpoena when he was D.A. When Thorne finds out that Two-Face has the file, he states that he will be ruined if Two-Face gives the file to the police. If Two-Face tried unsuccessfully for years to subpoena the file, then in all likelihood that means Thorne paid off the right people to prevent the subpoena from happening, so Two-Face giving the file to the police shouldn't be a problem for him. Additionally, if giving the file to the police would be all that it would take to bring Thorne down, then the new D.A. could have already done so. If the new D.A. was also paid off by Thorne, then it wouldn't make sense for Thorne to allow the D.A. to keep the file since they could easily lose the file or even double-cross Thorne. (00:10:45 - 00:14:20)
Plot hole: In the end of the episode, Wolverine is seen recuperating after surgery removes the microchip in his brain, and his head is bandaged. Performing invasive surgery on Wolverine's brain isn't possible, since that would require going through his adamantium-infused skull and no conventional material is capable of that. Only a less invasive technique (such as going through the cranial sutres or cranial foramen) would have been effective and that most likely would not have required Wolverine's head to be bandaged (especially with his rapid healing mutant ability).
Over My Head - S3-E4
Plot hole: Daphne was able to hurt Duke because his name appears on her cell when he called, but names only show up on a cell phone if the person's number and name are programed into the phone, and Duke has already said he doesn't know her.
The Monsters are Due on Maple Street - S1-E22
Plot hole: The street sign in the beginning is all wrong: it faces the camera rather than the street where the story takes place. In a typical American city, street signs are almost always placed in the direction of the street they are indicating, so drivers on the other street in the intersection know what they are turning onto or passing. In other words, the story is not set on Maple Street! Maple Street is the intersecting street at the end of the road the story is set on.
New York City Serenade - S3-E12
Plot hole: When talking to Hook about the photos, Emma states he could have photoshopped them to make it look like she and Henry were in Storybrooke, however she had taken them directly from Henry's camera and had them developed. So Hook had no way to photoshop the pictures from inside the camera. (00:27:00)
Plot hole: Guards at a security checkpoint attack Varrick and Bolin, because a wanted poster identifies them as fugitive traitors. The problem is that poster cannot have been there. Varrick and Bolin escape in the previous episode (Battle of Zaofu) but are captured minutes afterwards. (So, no posters needed.) The next day, they escape again by blowing up their imprisoning train car. Their captor, Bataar, thinks they are dead. Indeed, Varrick intended to die. Later, Bataar is actually shown reporting them dead. One might argue that the poster wasn't a wanted poster, but one that warned people about the empire making an example of the traitors.This argument is too flawed: The empire had many examples already, some very high-profile. And a propaganda poster must be placed in plain sight, not in a security booth corner especially designated to let security guards compare the passing individuals. (00:14:00)
The Messiah on Mott Street - S2-E38
Plot hole: No one in Goldman's house finds it at all strange that a mailman arrives at the door with a letter after midnight on Christmas Eve. Nor, a short time later, does the doctor or anyone else passing by at this very odd hour wonder why the same mailman is collecting mail from a street box at dawn on Christmas Day.
My Late Lamented Friend and Partner - S1-E1
Plot hole: When Jeff and Marty are parked, waiting for Sorrenson to exit the building opposite, Jeff says he should call the police. But he immediately follows Sorrenson and has no time to do so. Later, they arrive even though not called.
Plot hole: When Justin and Juliet were trapped behind the glass and Juliet let herself be captured by the mummy, so she doesn't burn to ashes when the morning comes, why didn't Juliet just escape? The mummy gave her enough time to turn around and share a moment with Justin, she could've used that time to fight him off, break Justin out and escape. The mummy wasn't very strong and Alex would've shown up 20 seconds later anyway, there wasn't any real reason for Juliet to just let herself be taken away.
Plot hole: In the poison room, Zelda is magically knocked unconscious where Everett explains to her, among other things, that there is a secret reservoir of magic. Plover then mentions the reservoir after Zelda awakens, as if he somehow heard the conversation in her head.
Hone made aishite? Akane koi o fukuzatsu kossetsu - S1-E5
Plot hole: Dr. Tofu is able to tell that Ranma was hit by a softball (he says something about the marks like he actually sees them), but Ranma's wound is still covered by the bandage, that he'll remove in the next episode. This is linked to a larger mistake in the following episode. (00:19:55)
The Beacon - S1-E26
Plot hole: Barrows introduces himself as "Dr. Dennis Barrows," and Teddy asks, "What's a doctor?" As the isolated villagers have never heard of doctors, Teddy would have no way to know that "Doctor" was a title/profession and not simply part of Barrows' name. He should have asked, "What kind of a name is Doctor?"
Plot hole: Cleo's photo album contains photos of her and Lewis from past episodes ("Love Potion", "Doctor Danger" and "Hocus Pocus"). It's impossible that their photos could have been taken because they were alone in all of them. (00:03:07)
Plot hole: During "the changes" people fear machinery, but the woman who pulls back her curtains to watch Nicky and the sikhs go past is wearing a watch.
Plot hole: Loki states while on trial that The Avengers should be on trial for traveling through time to change the timeline. How did he know they came back through time?
Suggested correction: He recognized that there were two Tony Starks in the lobby by the smell of their colognes, and combined with all the other unusual shenanigans going on, he correctly deduced the Avengers travelled through time, though he incorrectly thought it was to prevent his ascendancy.
How exactly do you distinguish the smell of cologne as belonging to two separate people? But besides that, it's pretty wild to jump to a conclusion about time travel when it could be that someone else happens to be wearing Axe.
I'm sure he simply recognized his voice.