Stupidity: When Donatello frees the professor, he gets his head in his visual range, and same goes for his thick inhuman hands, but he notices only when the plot says so, a few moments later. (00:52:50)
Suggested correction: The professor is in noticeable distress, likely from having been tied up for so long and hearing the fight between the foot soldiers and the turtles occurring just outside, so he isn't paying much attention to who is rescuing him at first; he just wants his hands untied and to get the tape off his mouth.
Stupidity: This highly trained squad of soldiers is sent into a known contaminated zone with all manner of chaos going on within in...and the second one of them sees a woman outside his APC he ignores a direct order and pops outside to see how she's doing.
Stupidity: *SPOILER* Cecilia does not want James (or anyone else) to know she uses/wears the "invisibility suit", which, recorded, makes it look like Adrian slits his own throat. Cecilia leaves the invisibility suit in plain view near the top of her open purse/bag, where James notices it and knows she kills Adrian. (01:51:35)
Stupidity: When Michael is heading to the hospital and he just learns that the Cloverfield Station is gone, the whole scene of him driving is super unreal. It looks like he's not even driving, like it's a self-driving car or something because the steering wheel doesn't move at all while he's driving, and he isn't looking at the road (staring into space). The whole scene just doesn't feel realistic. (00:43:48 - 00:44:30)
Stupidity: All of Robbie's circuits have been burned out as a result of Morbius ordering him to kill the Id monster. The crew only has 24 hours to get the ship loaded and a safe distance away from Altair IV before it explodes. But one or more of the crew spends the little time they have fixing Robbie, a very sophisticated piece of technology, who is working the controls at the end of the movie.
Stupidity: Very soon after Damon is stranded, one of the many satellites around Mars inevitably picks up the fact that he has moved various objects around his site, indicating that he's still alive. Yet it never occurs to him that this would obviously, eventually happen. In which case, his best option would be to simply spell out a message with debris and stay put instead of planning some 50-day journey.
Stupidity: Since we get frequent POV shots from their eyes, we see exactly what the creatures hunting Venom see. Even when the Codex disappears from their view, they can see distinctly Venom's shape, and they have no problem using their appendages and brute force against any and every creature. There are moments in the movie (such as the scene in Vegas) when the Xenophage just stops for no reason; even if the big blinking thing is gone, you can still see the shape it was attached to.
Stupidity: Central to the plot is the layout of the Mars lander. There are no seats or any restraints of any kind in the lander, which is ridiculous. Spacecraft require safety belts in order to prevent astronauts from being injured during rapid course corrections. Additionally, ordinary rolling desk chairs would not be sent into space, and would certainly not be placed on a landing vehicle.
Stupidity: The Analyst wishes to hide the true identity of Neo from anyone inside the Matrix, so his appearance is altered. But in this new Matrix Neo is also named Thomas Anderson, his name from before he was pulled from the Matrix originally, and he is a famous game developer that created a video game series called "The Matrix." It is frankly astounding that anyone actively looking for Thomas Anderson would not immediately see through this ruse and instead would be fooled by balding hair.
Stupidity: One of the actors microwaves bullets and then loads one into a weapon. Only problem: she/he (I did not pay attention) puts the round the wrong way around into the magazine. Then the person loads the magazine with the one round visible in the wrong direction into the weapon. I would say that this should not be working. :) (04:25:00)
Stupidity: Harrigan leaves his partner's badge on his grave where anyone could take it and use it to impersonate a cop or abuse it in other ways. (00:50:15)
Stupidity: After Noah shoots the Humanity Bureau vehicle following them, they continue down the road and stop at an old abandoned building that still has some sort of running water in it. Lucas has to go to the bathroom so his mother just lets him wander off by himself to find a restroom. She doesn't go with him or make sure he's fine. And this is in an area where they know that most of the residents are hostile, and they are being chased by the Humanity Bureau. Noah even calls her out on the stupidity of her letting Lucas go by himself and she claims it's because he needed to do number 2 and that Lucas insisted and he's not a little kid any more... Which doesn't excuse the stupidity of the action of letting an 11 year old go by himself to find a bathroom in such a situation. And ultimately it does lead to him getting found by Agent Westinghouse. (01:08:30)
Stupidity: I won't begrudge Father Lamont for instinctively grabbing for the first thing in reach to try to smother the box on fire (even if it is a pair of wooden crutches), but you'd think at some point he'd notice that he's just spreading the fire and making it much, much worse, but he keeps at it until the doctor finally returns with the extinguisher.