Other mistake: When the Doctor tells the Atraxi "Oh, you're not the first lot to have come here, there have been so many," one of the monsters shown from their scan of Earth is a group of Ood. Even if in one of their uprisings they attacked the Earth, it would have been in the far future. The Doctor has had no encounters with them on Earth, and he knows them to be peaceful, so why would they be amongst the aliens who have threatened the planet? The only Ood who has been to Earth at this point is Ood Sigma, and he didn't come to attack. In addition, a group of Hath is also shown. These aliens have never been seen on Earth at all. (00:53:30)

Doctor Who (2005)
1 other mistake in The Eleventh Hour

Visible crew/equipment: During the warehouse battle, around when the Doctor tells Donna, "Hold on, I'm coming", the film crew can be seen reflected in a door at the right of screen. (00:28:20)
The Doctor: I'm not... I'm not... I'm not from Mars!
More trivia for Doctor Who
Last of the Time Lords (3) - S3-E13
Question: Why does The Master fear The Doctor forgiving him? What's he forgiving The Master for exactly?
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Chosen answer: The Master knows that deep down, he deserves death for the crimes that he's committed throughout his life, and since he regards The Doctor as his arch-foe, he expects it to be at his hands. The fact that The Doctor is still willing to forgive him for all of his crimes hurts him more deeply than death would.
Captain Defenestrator