Other mistake: When Richard Dreyfus rushes to the street to grab the trash can as the trash truck is coming down the street, his family is the only one on the block that has their trash cans out. It's obviously trash day and many of the houses are yet to be serviced by the approaching trash truck. (01:14:30)
Other mistake: In the climactic scene at the end of the movie when the alien mothership flies over Devil's Tower and the base, there is a shot of the mothership's shadow creeping along the ground, enveloping the shadows of the crew there. It's a dramatic shot, but since the mothership was not between the ground and the light source (the stadium lights of the base) it should not be blocking out the light, or creating a shadow. (01:55:08)
Other mistake: One visual that has always bothered me that I could not find in your list were the scenes when the mother ship first appears. It's enormous scale appears to dwarf Devil's Tower and the whole surrounding area actually, but when it moves over to the "landing strip" area and begins to rotate 180° (right-side up?), it suddenly seems to shrink to a much smaller size and mass during the slow revolution. On its originally-seen scale above/behind the tower, one would think that either the great ship's outer prongs would have been torn off, or more likely the impromptu landing site and most of Devil's Tower would have been destroyed as the huge craft rotated itself. The visual scales just do not stay consistent throughout the film's climactic final act.
Answer: Devil's Tower really is out in the middle of nowhere, and in one of the least populated states (it's "only" 90 miles away from Mt. Rushmore, but it's an incredibly boring 90 miles of mostly empty plains) so it didn't make for a convenient tourist attraction like other landmarks and thus didn't garner as much fame (it's actually much more famous nowadays, thanks to this movie). That said, the movie seems to have cleverly provided two separate "reveals" for this plot turn: those familiar with Devil's Tower will recognize it when Richard Dreyfuss knocks the top off his sculpture, giving it the distinctive "flat top" shape; then, only minutes later the rest of the audience will discover it along with the characters during the news broadcast. It wouldn't surprise me at all if this was set up deliberately keeping in mind the landmark's status of "kind of famous but not really THAT famous."
TonyPH
Your explanation (and the other answer) helps makes the overall plot more understandable. The French scientist, Lacombe, mentions that there were probably hundreds of people who were implanted with the Devil's Tower image in their minds. As pointed out, it is not a particularly recognizable landmark, which would explain why many never made the connection to it.
raywest ★