Corrected entry: The Pegasus is presumably a newer Battlestar than Galactica (which was slated to be decommissioned when the Cylons attacked), and its complement of Vipers is of a newer model, presumably the Mark V. The newer Mark V Vipers were in use by the majority of the Human fleet defending the Colonies in the miniseries were easily jammed by the Cylons, rendering them worthless, yet the Pegasus' Vipers are unaffected by the Cylons they've encountered.

Battlestar Galactica (2003)
1 corrected entry in season 2
Starring: Mary McDonnell, Edward James Olmos, James Callis, Jamie Bamber

Kobol's Last Gleaming (2) - S1-E15
Visible crew/equipment: In the scene where Starbuck attempts to retrieve Apollo's arrow, a crewman in a red tee shirt and dark vest can be seen standing just behind and to the right of the display case as she is shooting out the glass.
Starbuck: Starbuck to all Vipers. Do not fire! Repeat: Do NOT fire! I am a friendly, okay? We're all friendlies...so let's just...be...friendly!
Battlestar Galactica (2003 Miniseries) - Part 1 - S1-E1
Trivia: When Laura Roslin is in the doctor's office, just before the doctor walks in and tells her about having cancer, there is a wide camera shot through the large ceiling window of ships flying by outside. If you look closely you will see one of the ships is Serenity from the TV show Firefly.
Question: In the first main movie, Baltaar the traitor (as a human) is executed before the Cylon's supreme ruler; yet in the later movies (and probably the TV series, which I did not get to watch) he reappears. How can this be possible?
Answer: The original BSG has something of a complex version history. Several versions exist, but the rationale behind what you're referring to is as follows. BSG, before anything else, was a TV series - the 'pilot episode' was a three-part tale called "Saga of a Star World". In that three-parter, a last-minute alteration to the script meant that Baltar was ultimately spared execution, because Glen A. Larson, the series producer, decided that he liked the Baltar character enough to keep him around for the rest of the series. The theatrical version, which was edited down from the three-parter and was shown in some countries before the US TV broadcast, lost quite a number of scenes, including the one where Baltar is spared. The real continuity of the series can only be found in the TV version - the movies, all of which were created by editing together existing episodes, miss out scenes leading to such apparent continuity errors.
Answer: Baltar wasn't executed... the supreme leader decided to spare him to send him on a peace mission with the humans. I have every episode... just watched it again.
Answer: Strange... given I saw Battlestar Galactica at the movies when I was a kid. Aka the 'pilot' you refer to (which WAS a movie shown at the cinema).
Yes, there was a theatrical release of the film, which was released after the original 1978 series ended. This 1979 film is the edited compilation of the 1978 series "Saga of a Star World" episode.
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Correction: The Pegasus took heavy loses during the same opening day of the new war, so it's certain they, too, had problems with their Mark VIIs (not Vs) at the time, but a lot of time has passed since, and both Pegasus and Galactica have since overcome the problems that the Mark VII's had that day, as both are using them.
johnrosa