Visible crew/equipment: In the catacombs after Indy passes the picture of the Ark Of The Covenant and approaches the next wall with the lighter, (when the screen goes upwards a bit) the shadow of a boom mic can be seen dropping into view at the top of the lighted wall. (00:31:40)
Continuity mistake: Indy slams a pole against the big X on the floor and produces a hole. When the angle changes the shape of the hole is completely different.
Revealing mistake: When the tank shoots-up the jeep the interior is revealed to be empty and such a prop.
Continuity mistake: While in the zeppelin, the German officer extends his baton and lowers Dr. Jones's newspaper, wrinkling it. From the opposite angle, the newspaper is still raised and the officer repeats the previous movements, though this time he doesn't wrinkle the newspaper.
Continuity mistake: Hitler walks surrounded by a huge crowd ahead holding Nazi pennants. When Indy bumps into Hitler, half a second later, the pennants on the left have disappeared.
Continuity mistake: Dr. Jones hugs his son and walks 20 meters away. When he turns around to address him, he is barely 5 meters away.
Continuity mistake: When a jeep gets stuck to the tank's cannon, the type of jeep, its position and the damage done changes between the first and second shot (watch how the smashed windows fix themselves, for example).
Continuity mistake: In front of the main tribune there's a pile of burning books. First the fire is just atop, a frame later the whole pile is burning.
Continuity mistake: When Indy jumps on Kazim's boat, Elsa's boat is inches away from Kazim's, but a shot later she has managed to appear somewhere else with no boats around.
Continuity mistake: When about to walk on air in the temple, Indy says, "No one could jump this". In the close-ups his hands are spread apart, but in the wide angle they are grabbing the diary.
Revealing mistake: Dr. Jones fires at the jeep from the tank, but the explosion doesn't come out the cannon, nor by the jeep's window next to it; instead the back of the jeep explodes.
Continuity mistake: The German Nazi suddenly disappears from the tank when it crashes on the ground (as is replaced by an obvious scale model).
Visible crew/equipment: After Dr. Jones is healed, Indy tells him to stand up. Stage lights are reflected in Dr. Jones's glasses.
Continuity mistake: When Donovan turns into a living corpse the badge on his lapel disappears.
Continuity mistake: When Donovan drinks from the grail his left hand holds the base with extended fingers. A frame later they are bent.
Continuity mistake: When Indiana's dad blows up the truck beside them during the chase, there's a big explosion. However, in the next shot showing Indiana and Ernst Vogel, the same explosion behind them is smaller.
Revealing mistake: When Walter Donovan is dying after drinking from the wrong cup, watch the over-the-shoulder shot where we see his hair grow long suddenly - for some reason, this shot was filmed in reverse, as the fire coming from the candles/torches behind Elsa is not burning upwards, but appears to be "sucking" back downwards.
Factual error: When Indy and his father rotate into the control room, the eagle on the uniform of the woman who raises the alarm is on the wrong side, left instead of right.
Suggested correction: As it's an SS uniform, the eagle insignia should be on the upper left arm.
Continuity mistake: When Indy and Kazim are about to jump off from the chopped boat, the boat swaps from sinking to floating between frames.
