Continuity mistake: In the shot after Belloq's death, the generator and the rock Indy and Marion are on have disappeared.
Continuity mistake: As Dietrich and Gobler come into the tent, Toht's leather case can be seen already opened. In the next shot, the case is suddenly closed.
Continuity mistake: When Indy abruptly brakes the truck and the Ark box slides backwards, the poles on either side of the box have disappeared.
Continuity mistake: During the procession, there are four soldiers carrying banners. When they arrived at the Altar, one has disappeared.
Continuity mistake: During the procession, after Indy hides behind the box, Captain Mohler can be seen walking with the soldiers behind the Ark. In the next shot, he's walking in front of the Ark.
Continuity mistake: In the first scene of the procession, the Nazis are walking in a straight line along a path. In the next shot, they are now going around a curve.
Continuity mistake: When Marion gets off the submarine, there are two soldiers behind her. In the next shot, one of the soldiers has disappeared.
Continuity mistake: When the Wurffler arrives to Geheimhaven dock, six soldiers and an officer are running towards the submarine. In the next shot, the seven men have disappeared.
Continuity mistake: During the procession scene, in the shot before Toht takes off his hat, about twenty soldiers can be seen walking. After Indy leaves the procession and hides behind a box, in the next shot, there appear to be twice as many soldiers as in the first scene. Just before Indy shouts "Hello!", the quantity has returned to twenty.
Continuity mistake: After the kliegs behind Dietrich, Belloq, and Toht explode, the Ark energy begins to destroy the soldiers' guns and the kliegs next to them (including Indy and Marion's). In some shots, the kliegs on the altar are still working.
Continuity mistake: Just before Belloq says "It's beautiful!", there is a black machine (which is not the German camera or the generator) in the bottom middle of the screen, just below the approaching ghost. It is also visible when the Angel of Death is revealed. This machine disappears when the Ark begins to kill the soldiers.
Continuity mistake: After the kliegs and generator explode, there is a shot of Belloq and Toht on the altar. Belloq has the ivory rod in a vertical position. In the next shot, the rod is horizontal.
Continuity mistake: When Indy and his excavation team arrive at the true location of the Well of Souls, we can see that it is on a low hill, just a few meters from the Nazi excavations. However, when it gets dark, we can see that the excavations have disappeared from view and now the Well of Souls appears to be on a considerably high mountain (taking as a reference the illuminated camp on the right of the screen).
Continuity mistake: In Hangar 51, the size and position of the text in the Ark's box changes between shots.
Continuity mistake: When the Nazis are aboard the Bantu Wind, in the full scene of the ship deck, Toht stands behind Belloq. But, after Marion tries to hit Dietrich, the camera focuses on Belloq, then on Dietrich again. Toht is not seen anymore on the deck.
Continuity mistake: In the chapel, before Indy turns the chalkboard over to explain the staff of Ra and the medallion to the G-men, the chalkboard goes back and forth from tilting forward to tilting backward a few times.
Continuity mistake: When Belloq and the Germans are at the Well of the Souls, a top-down view shot when Indy yells, "Why don't you come on down here and I'll show you!" shows Belloq and a German officer kneeling down to the left of him, also looking down into the hole. But the side view shots show only Belloq standing near the opening.
Continuity mistake: When the Cairo Henchman pulls the knife on Marion, the blade edge changes position from down to up to down again.
Continuity mistake: When Indy sits down in the seat of the plane look behind him, there is nobody holding a Life magazine or fitting the description of the man later shown watching him from the other seat.
Suggested correction: This is not true. Dennis Muren enters just before Indy and sits down. The camera focuses on Indy, giving Muren enough time to grab the magazine and cover his face.
Continuity mistake: During the truck chase, as Indy is fighting with the German driver, they knock over some scaffolding and a man drops down in front of the windshield. None of the workers on the scaffolding landed on the truck, much less the front of it. So, he shouldn't have been there.
