Continuity mistake: During the opening sequence of every episode, Dexter prepares for his day. The first thing he does is shave and then fixes breakfast. But by the time he starts eating, he already has long stubble.
Deliberate mistake: Whenever Dexter injects somebody with M99, they are immediately rendered unconscious. In reality, this would take several minutes.
Answer: The short answer is yes, it could. but, it would have to be set up to analyze results to differentiate species. The sequencer will report the base pairs for any properly prepared sample, but interpreting the results is a software package. The software is available, but I would think it unlikely that an analysis package used in a forensics lab would have the capability to be so specific. More likely it would report "Non Human Sequences Found."