Visible crew/equipment: When they are at the crime scene, you can plainly see the camera and camera man reflected in Special Agent Lundy's sunglasses several times. When it is a close up shot, it is even more obvious.
Revealing mistake: When Deb is texting "Looks like it" to Anton, the buttons she presses on the keypad do not correlate with the message itself and the phone doesn't show any auto-correct feature being utilized, indicating that the text message was added in post production.
Other mistake: An extra is walking in the background with a measurement wheel while Debra is talking with Lundy outside of the warehouse. The character is hovering the wheel over the ground and not actually using it for its intended purpose. (00:17:10)
Answer: The short answer is yes, it could. but, it would have to be set up to analyze results to differentiate species. The sequencer will report the base pairs for any properly prepared sample, but interpreting the results is a software package. The software is available, but I would think it unlikely that an analysis package used in a forensics lab would have the capability to be so specific. More likely it would report "Non Human Sequences Found."