Starring: Dominic Purcell, Robert Knepper, Wentworth Miller, Amaury Nolasco
Under & Out - S3-E11
Plot hole: Gretchen, Lincoln, and Sophia were able to visit Scofield and Whistler in Sona without Gretchen being recognized. She was taken in for questioning in episode 9, but she managed to escape and kill General Zavala and one other guard. The other guards knew that she was the one who killed Zavala but she was still able to sign in for visitation.
Continuity mistake: Sucre and C-Note came to Michael's help with dealing with the general. Sucre has noticeably longer hair than normal. In the next clip his hair is gone. (00:20:00 - 00:21:00)
Michael Scofield: This is going wrong in every possible way. (00:05:10)
Trivia: The show was filmed in an actual prison (now unused) in Joliet. The death row cell used for Lincoln Burrows is the actual death row cell that held serial killer John Wayne Gacy.
Question: How does Don Self know that Miriam should work at Gate when nobody knew about the location of Scylla? Or Whistler wanting to work there?
Answer: Because Miriam was an agent.
But that still doesn't make sense because nobody knew where Scylla was.
He knew that GATE was mentioned in the bird book. He worked with Whistler and had probably discussed GATE with him, so it was clear enough that it was a big part of the plan to get Scylla. Sending an agent to work there in any position would've been a big help for intel, as she could assess the environment and perhaps uncover what Whistler's plan was. He didn't anticipate T-bag's hijacking of the plan, hence why he sent Miriam and not a more combat-trained agent. She was only there for information.
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Answer: Don Self actually worked with Whistler before he died. And Whistler with the bird book actually knew where Scylla was.