Krusty Towers/Mrs. Puff, You're Fired - S4-E9
Continuity mistake: When the fish is at the front desk of the Krusty Towers, there is a silver bell on the desk. When Patrick arrives, there is no bell. Then Mr. Krabs puts Squidward in his place, and the bell is back, but has moved to the opposite side of the desk.
Ghost Host/Chimps Ahoy - S4-E10
Continuity mistake: In "Ghost Host", Spongebob rips off a bit of sponge and drops it on the ground. Two shots later, his head is back to normal and the sponge on the floor is gone.
Ghost Host/Chimps Ahoy - S4-E10
Continuity mistake: In "Ghost Host", the Flying Dutchman is falling down the side of a cliff. When he lands on the ground in the next shot, the cliff is gone.
Ghost Host/Chimps Ahoy - S4-E10
Continuity mistake: In "Chimps Ahoy", a robot is lying down on a log. The robot gets up and peels the banana one of the chimps was holding. In the next shot, the log has completely disappeared.
Ghost Host/Chimps Ahoy - S4-E10
Continuity mistake: In "Chimps Ahoy", Spongebob removes a helmet he was wearing and holds it in his hands out of frame. In the next shot, the helmet is missing and not on the ground.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", Patrick goes up to the man with a briefcase holding a pad of paper and a pencil. In two shots, the pad and pencil Patrick was holding disappears.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", there is a place card on the table Mr. Krabs is sitting at. When he puts a sheet over the table, the spot where the card was, doesn't bulge.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", Patrick has some type of glasses, which he takes off his face and holds in his hand. In the next shot, they disappear.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", Spongebob has a tray with two lemonades and gives one to Patrick. In two shots, the tray and the two glasses of lemonade disappear.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "Squidtastic Voyage", Squidward drinks many bottles of soda to try and get Spongebob and Patrick out of his stomach. Two shots later, these bottles all disappear without anyone touching them.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In 'Squidtastic Voyage", Spongebob uses a remote to open the doors of the submarine. This remote disappears in the next shot.
Selling Out/Funny Pants - S4-E5
Continuity mistake: In "Funny Pants" when Mr. Krabs tells SpongeBob to touch the money the anchor on the door is yellow. In the next shot, it is red, like it is in other episodes.
Selling Out/Funny Pants - S4-E5
Continuity mistake: In "Selling Out" when the Krabby O'Mondays is just about to flood, SpongeBob and Squidward have their Krusty Krab hats on. About ten seconds ago, they had their Krabby O' Mondays' hats on.
Continuity mistake: In "New Leaf", When Mr. Krabs throws Plankton's snow globe in to the room, there is no lock. In the next shot, there is.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", Squidward is standing at the register, holding a newspaper. When it cuts to "Patricia", and back to Squidward, Squidward isn't holding the newspaper anymore.
Skill Crane/Good Neighbors - S4-E4
Continuity mistake: In "Good Neighbors", Squidward stomps on Spongebob and Patrick's fezzes in front of his door. Then, it cuts to a shot of Squidward's house, but the fezzes are gone.
Fear of a Krabby Patty/Shell of a Man - S4-E1
Continuity mistake: When Mr. Krabs drags SpongeBob back into the kitchen, Squidward's facial expression changes between shots.
Squidtastic Voyage/That's No Lady - S4-E15
Continuity mistake: In "That's No Lady", Patrick runs through Spongebob's wall, leaving a Patrick-shape in his house. Patrick pushes a bit of Spongebob's house, which disappears in the next shot.
Answer: I believe this is the Season 6 episode "Spongicus".