Jellyfishing / Plankton! - S1-E3
Other mistake: In "Jellyfishing", when SpongeBob and Patrick walk back to their houses covered in bandages, when SpongeBob says "Hey, Patrick." Patrick is mouthing what SpongeBob says.
Mermaid Man and Barnacle Boy / Pickles - S1-E6
Other mistake: In the end credits for the episode "Pickles", Bubble Bass is named "BubbleBass" (without a space).
Sandy's Rocket / Squeaky Boots - S1-E8
Other mistake: In the episode "Sandy's Rocket", Spongebob and Patrick go "alien-hunting." SpongeBob and Patrick are in Squidward's house. But when SpongeBob holds the hot water bottle, and he says "No, it's an egg-sack!", one of the drops leaking from the bottle goes up instead of down.
Nature Pants / Opposite Day - S1-E9
Other mistake: When SpongeBob throws the fire extinguisher at the grill, the patties are shifted to the left and appear to be floating.
MuscleBob BuffPants / Squidward, the Unfriendly Ghost - S1-E11
Other mistake: When Squidward is on the royal bed, Spongebob's Pineapple is nowhere in sight.
The Chaperone / Employee of the Month - S1-E12
Other mistake: When Pearl is crying in the Krusty Krab, the customers are just the same person over and over and over.
Other mistake: Rock Bottom: When SpongeBob sets up a cardboard version of himself and is shown sneaking to the bus, his holes are missing and he is perfectly square, instead of his usual sponge-like shape. (00:18:47)
Chosen answer: You need to provide a little bit more information to be able to answer a question like this. In what region is it not being shown? I see it being replayed here in Australia fairly frequently. As for a general reason, there does not appear to be any for why it specifically might have been taken off the air in any country or region. Like any show certain episodes can sometimes not be replayed for long periods for unknown reasons.
Lummie ★