Revealing mistake: At the beginning, Lional's limo comes to a screeching halt on railroad tracks. The camera is panned out to where you can see this happen. The black tire marks that are supposed to appear from the hard braking are already present, which means there were multiple takes.
Revealing mistake: After Lana is warned by Chloe that Clark has gone all 'Captain Paranoid', she examines the silver 'meteor rock' more closely. We see a shot of her hand holding the 'meteor rock' but the hand that is shown is obviously not Kristin Kreuk's hand.
Answer: The kryptonite only creates mutations when it reacts with the environment and an individual. Remember, the FDA and several environmental groups did check out Smallville after the meteor shower, but found no danger in the rocks. Obviously they're not always emitting mutating rays, or all the flora and fauna of the surrounding area would be horribly mutated.
Phoenix