Corrected entry: We don't see where Moneypenny shot Bond, and are never told later in the film, but no wound is visible when he is swimming, or when Silva undoes his shirt, only the wound he got on the train in the right shoulder.
roboc
24th Dec 2012
Correction: Moneypenny's shot hit Bond in the same place [or very nearly] as his earlier wound. You can clearly see in the scene where he digs the bullet shrapnel from his scar tissue that there are two bullet shaped scars, a small one from the train and a larger one from Moneypenny's rifle.
roboc