Corrected entry: We see Agent Smith shoot at the phone booth to destroy the handset just as Trinity left the Matrix. During the fight scene with Agent Smith, you catch a glimps of the phone booth glass, and it is intact.
rgbtechsolutions
6th Jun 2003
Correction: The only clear shot we get of the phone booth is just before Neo's running/jumping multi-kick to Smith's chest, and there's a clear bullet hole through the glass.