
Visible crew/equipment: In the shoot 'em up scene at the hangar near the beginning of the film, right after Tito and Wanda take down Pollux, when Troy shoots an agent in the stomach and the agent flies back - you can see at least two cable wires pulling him backwards. You can first notice the 2 wires when the agent is running in slow motion right before he shoots him. (00:14:15)
Chosen answer: Although they were on the same side, Troy is currently posing as Archer, which means he would have to do everything that the FBI would expect Archer to be doing. The whole point of the raid was to take out Archer, as well as Troy's gang. He would have rather risked killing part of his own gang than risk exposing his identity to anyone else.
Casual Person
That doesn't really make sense. In the scene, he goes out of his way to shoot him and smiles while doing so, carefully and slowly. Was not a collateral damage situation. The question is why he deliberately goes out of his way to kill him.