Audio problem: In the final fight scene between Liu and Shang Tsung, Liu hits Shang in the face repeatedly, but there is one extra hit sound for which there is no motion.
Audio problem: There are several times throughout the film when Miss Minchin is playing her harp and her finger movements does not match with what we hear.
Audio problem: When the Bat Exterminator is pointing at the book in the attic, he says "Some kid said she saw a bunch of those back in the 60's." His mouth is visible in the screen, however it doesn't move at all. (00:18:50)
Audio problem: Another audio problem in the same scene: As Brian Engle is approaching the cockpit, there is some more muttering, presumably in this order (using actors initials: MLC: Right, Good God. PW: Is he (muffled) MLC: I know, I seem real strange. He's outta control.
Audio problem: When Andy is in his cardboard Buzz costume, and says "Buzz Lightyear to the rescue, " his mouth doesn't move.
Audio problem: The Nutcracker pulls on a string in Marie’s wardrobe and a letter lowers from a sleeve of one of her dresses. Nutcracker grabs it and turns back saying “Hurry! Everyone will be waiting.” The dialog is not at all in sync with his mouth at this part. You hear him speak, and he almost finishes the line before his moves begin to move. Then once the audio stops, you see his mouth continue to move like he still speaks for a bit.