Continuity mistake: When the Nazis board the Bantu Wind, there are some shots of the pipe Indy is hiding in. During these shots, there's a big grey pipe right behind Indy's pipe. However, in the rest of the Bantu Wind shots, this grey pipe is on the left of Indy's pipe, not directly behind it. (01:36:19 - 01:37:05)
Visible crew/equipment: When Indiana frees Marion, locked in the cabin pilot of the Nazi plane just after one of the soldiers is killed by the blades, a set light is reflected on the plane's glass. (01:20:32)
Continuity mistake: In Geheimhaven, Indy watches the submarine hidden behind some ropes. When Marion comes out of the submarine and the camera focuses on the back of Indy's head, the ropes disappear. (01:39:13)
Answer: The scene you describe was indeed filmed. It was cut out of the US release of the film although I cannot speak for the Australian version. The scene also appears in the Marvel Comics adaptation. http://www.theraider.net/films/raiders/deleted_scenes.php has a list of this and the other deleted scenes.
Phil C.