Other mistake: When Zola's algorithm is deployed and begins it shows the radius which barely reaches Staten Island, however it finds Tony Stark in NYC.
Suggested correction: The initial targeting radius shown at 1:53:27 is as you say. But the radius keeps growing. At 1:53:50, it is still growing and has almost reached Lake Ontario.
Suggested correction: It's possible certain people were pre-programmed in.
Other mistake: At the end when the ship crashes that part of the city is leveled - we see injured people, but no one is covered in dust or dirt thrown up by the impact - everyone is clean.