Audio problem: Right before the jet fight, Logan asks Storm "How far are we?" He says this line in his natural Australian accent. (01:04:50)
Audio problem: On the freeway when the Twin stops firing when the car goes behind a truck (shortly before he floats into the car), you can hear about 5 shots being fired by him after the muzzle flashes stop and the gun stops shaking. (01:22:15)
Audio problem: As soon as Nemo begins playing the record, we hear a woman say "Ready, professor?". However, the actual recording doesn't start until the needle is put into position, which is after she says that.
Audio problem: As the trio break into the club, they take on some bouncers. One of them gets his gun turned on him by Trinity, pushed right into his chest - we hear two gunshots, with corresponding wounds, then a third shot which has no effect. (00:14:50)
Audio problem: When the female TX is stopped by police during the intro credits, before the officer speaks you can see the TX's lips moving saying "Is there a problem officer" but her audio is muted. (00:08:50)
Audio problem: During the scene where Talbot approaches Betty by the elevator, it splits and in doing so the top left screen does not speak, but the bottom right does, and they are supposedly "Sync"ed.
Audio problem: When the man in the car on the Golden Gate Bridge gets crushed, you can hear him screaming, but his reflection in the rear-view mirror shows that his mouth is closed.
Audio problem: When Jennings finally reaches the machine and tries to see his future, before fixing it, we see him activating the machine. There are seven clicks as he flips on the switches at his right hand, however, there are only six switches.