Other mistake: In the scene when the helicopters arrive over the research center, look at the heli in the bottom right - it just fades out, while one on the left materialises, and the one in the middle changes position. Notice that after all the helicopters have changed place, you can see the helicopter that faded out appear on the helipad. (02:25:25)
Revealing mistake: When Zeus throws his Master Bolt at Hercules and creates an explosion, a long wire appears. Seemingly, it is the guiding wire or some mechanism to achieve the fire.